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SUMMARY:The Biobank Rare Variant consortium powers the discovery of rare g
 enetic associations through global collaboration
DTSTART;TZID=Europe/London:20260526T093000
DTEND;TZID=Europe/London:20260526T103000
DTSTAMP:20260515T220025Z
UID:bdf1a3c6-3a28-f111-88b3-7c1e5278f34a
CREATED:20260325T110720Z
DESCRIPTION:For our next talk\, in the BDI/CHG (gen)omics Seminar series\,
  we will be hearing from Duncan Palmer\, SMARTbiomed Senior Research Fello
 w\; co-lead\, the Biobank Rare-Variant Consortium (BRaVa)\, BDI and Depart
 ment of Statistics\, University of Oxford. We’re delighted to host Dunca
 n in what promises to be a great talk!\n\nDate: Tuesday 26 May\nTime: 9:30
  am – 10:30 am\nTalk title: The Biobank Rare Variant consortium powers t
 he discovery of rare genetic associations through global collaboration\nLo
 cation: Big Data Institute\, Seminar Room 0\n\nAbstract\nRare coding varia
 nts can have large effects on disease risk\, but their discovery is fundam
 entally constrained by sample size. The low frequency of these variants li
 mits power even in the largest individual biobanks\, particularly for dise
 ase endpoints. Here we introduce the Biobank Rare Variant Analysis (BRaVa)
  consortium\, which unites 10 biobanks and cohorts\, comprising over 1.25 
 million individuals with matched genetic and healthcare record data\, to a
 dvance our understanding of the genetic basis of human disease.\n\nWe perf
 ormed gene-based meta-analyses of rare coding variation across 32 disease 
 endpoints and 12 quantitative traits in diverse populations. Aggregating e
 vidence across biobanks and ancestries substantially increased power\, ide
 ntifying 579 gene-trait associations\, including 36 not previously reporte
 d in prior studies or curated genetic association resources following syst
 ematic literature curation. Notably\, 42.5% of associations were not detec
 ted in any individual biobank\, and 111 were identified only through cross
 -ancestry meta-analysis\, demonstrating that large-scale integration enabl
 es discovery beyond the reach of single cohorts\; improvements in discover
 y were also observed at the variant level\, where 15.8% of associations we
 re detectable only through meta-analysis.\n\nEffect size estimates were co
 nsistent across genetic ancestries with concordant directions of effect\, 
 supporting the generalizability of rare variant associations. The identifi
 ed signals implicate biological pathways spanning transcriptional and epig
 enetic regulation\, metabolic homeostasis\, vascular and epithelial biolog
 y\, and immune function. These findings highlight the ability of rare codi
 ng variation to directly implicate causal genes and disease mechanisms. Fo
 r example\, damaging variation in ANKRD12 implicates dysregulated transcri
 ptional control of inflammatory pathways in asthma and chronic obstructive
  pulmonary disease\, while ultra-rare predicted loss-of-function variants 
 in NAA15 link protein acetylation processes to type 2 diabetes risk.\n\nTo
 gether\, BRaVa establishes a scalable framework for rare variant meta-anal
 ysis across global biobanks and enables systematic discovery of gene-level
  mechanisms underlying complex human disease\, accelerating the identifica
 tion of biologically grounded therapeutic targets as sequencing resources 
 continue to expand.
LAST-MODIFIED:20260512T095413Z
LOCATION:Big Data Institute - Lower Ground Seminar Room 0\, Lower Ground S
 eminar Room 0 Big Data Institute Old Road Campus Oxford Oxfordshire OX3 7L
 F United Kingdom
SPEAKER:Duncan Palmer (BDI\, University of Oxford)
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